Complete genome analysis of highly pathogenic bovine ephemeral fever virus isolated in Turkey in 2012

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dc.contributor.authorAbayli, Hasan
dc.contributor.authorTonbak, Sukru
dc.contributor.authorAzkur, Ahmet Kursat
dc.contributor.authorBulut, Hakan
dc.date.accessioned2020-06-25T18:22:41Z
dc.date.available2020-06-25T18:22:41Z
dc.date.issued2017
dc.departmentKırıkkale Üniversitesi
dc.descriptionabayli, hasan/0000-0003-2116-105X;
dc.description.abstractRelatively high prevalence and mortality rates of bovine ephemeral fever (BEF) have been reported in recent epidemics in some countries, including Turkey, when compared with previous outbreaks. A limited number of complete genome sequences of BEF virus (BEFV) are available in the GenBank Database. In this study, the complete genome of highly pathogenic BEFV isolated during an outbreak in Turkey in 2012 was analyzed for genetic characterization. The complete genome of the Turkish BEFV isolate was amplified by reverse transcription-polymerase chain reaction (RT-PCR) and sequenced. It was found that the complete genome of the Turkish BEFV isolate was 14,901 nt in length. The complete genome sequence obtained from the study showed 91-92% identity at nucleotide level to Australian (BB7721) and Chinese (Bovine/China/Henan1/2012) BEFV isolates. Phylogenetic analysis of the glycoprotein gene of the Turkish BEFV isolate also showed that Turkish isolates were closely related to Israeli isolates. Because of the limited number of complete BEFV genome sequences, the results from this study will be useful for understanding the global molecular epidemiology and geodynamics of BEF.en_US
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TUBITAK)Turkiye Bilimsel ve Teknolojik Arastirma Kurumu (TUBITAK) [114O668]en_US
dc.description.sponsorshipThis research was financially supported by the Scientific and Technological Research Council of Turkey (TUBITAK Project no. 114O668).en_US
dc.identifier.citationclosedAccessen_US
dc.identifier.doi10.1007/s00705-017-3470-6
dc.identifier.endpage3238en_US
dc.identifier.issn0304-8608
dc.identifier.issn1432-8798
dc.identifier.issue10en_US
dc.identifier.pmid28674863
dc.identifier.scopus2-s2.0-85021811604
dc.identifier.scopusqualityQ3
dc.identifier.startpage3233en_US
dc.identifier.urihttps://doi.org/10.1007/s00705-017-3470-6
dc.identifier.urihttps://hdl.handle.net/20.500.12587/6867
dc.identifier.volume162en_US
dc.identifier.wosWOS:000410909200039
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherSpringer Wienen_US
dc.relation.ispartofArchives Of Virology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.titleComplete genome analysis of highly pathogenic bovine ephemeral fever virus isolated in Turkey in 2012en_US
dc.typeArticle

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